Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gfo/idh/moca family protein | AMED_RS08570 | Not Available | Positive | 1791726 - 1792868 | 41991.5 |
| sorbosone dehydrogenase family protein | AMED_RS08575 | Not Available | Negative | 1793454 - 1794662 | 39805.9 |
| 2-hydroxyacid dehydrogenase | AMED_RS08580 | Not Available | Positive | 1794728 - 1795636 | 32420.4 |
| doxx family membrane protein | AMED_RS08585 | Not Available | Positive | 1795674 - 1796249 | 19857.4 |
| dihydroxy-acid dehydratase | AMED_RS08590 | Not Available | Negative | 1796524 - 1798368 | 64823.1 |
| ph domain-containing protein | AMED_RS08595 | Not Available | Negative | 1798492 - 1799013 | 19012.3 |
| acetolactate synthase large subunit | AMED_RS08600 | Not Available | Positive | 1799268 - 1801160 | 67180.1 |
| acetolactate synthase small subunit | AMED_RS08605 | Not Available | Positive | 1801162 - 1801668 | 18257.4 |
| ketol-acid reductoisomerase | AMED_RS08610 | Not Available | Positive | 1801705 - 1802718 | 36464.2 |
| duf397 domain-containing protein | AMED_RS08615 | Not Available | Positive | 1802798 - 1803079 | 10435.0 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
