Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad-dependent dna ligase liga | AMED_RS08520 | Not Available | Positive | 1781262 - 1783442 | 79867.2 |
| gnat family n-acetyltransferase | AMED_RS08525 | Not Available | Positive | 1783435 - 1783929 | 18204.9 |
| amino acid-binding protein | AMED_RS08530 | Not Available | Negative | 1784000 - 1784653 | 22592.1 |
| asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatc | AMED_RS08535 | Not Available | Positive | 1784889 - 1785188 | 10524.5 |
| asp-trna(asn)/glu-trna(gln) amidotransferase subunit gata | AMED_RS08540 | Not Available | Positive | 1785185 - 1786702 | 52584.3 |
| asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatb | AMED_RS08545 | Not Available | Positive | 1786699 - 1788204 | 54409.6 |
| hypothetical protein | AMED_RS08550 | Not Available | Positive | 1788213 - 1788743 | 19205.6 |
| gfo/idh/moca family protein | AMED_RS08555 | Not Available | Positive | 1789023 - 1790093 | 38687.3 |
| pmoa family protein | AMED_RS08560 | Not Available | Positive | 1790090 - 1791010 | 34281.9 |
| cupin domain-containing protein | AMED_RS08565 | Not Available | Positive | 1791007 - 1791729 | 25343.9 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
