Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | AMED_RS08470 | Not Available | Positive | 1771182 - 1772549 | 46630.1 |
| cysteine desulfurase family protein | AMED_RS08475 | Not Available | Positive | 1772614 - 1773810 | 41357.2 |
| trna 2-thiouridine(34) synthase mnma | AMED_RS08480 | Not Available | Positive | 1773815 - 1774906 | 38483.6 |
| duf222 domain-containing protein | AMED_RS08485 | Not Available | Negative | 1774914 - 1776188 | 46301.2 |
| gnat family n-acetyltransferase | AMED_RS08490 | Not Available | Negative | 1776386 - 1776838 | 16664.9 |
| gnat family n-acetyltransferase | AMED_RS08495 | Not Available | Negative | 1776849 - 1777250 | 14625.6 |
| mbl fold metallo-hydrolase | AMED_RS08500 | Not Available | Negative | 1777330 - 1778373 | 38012.0 |
| phospholipid scramblase-related protein | AMED_RS08505 | Not Available | Negative | 1778479 - 1779303 | 30528.1 |
| methionine synthase | AMED_RS08510 | Not Available | Positive | 1779425 - 1780462 | 36269.4 |
| hypothetical protein | AMED_RS08515 | Not Available | Positive | 1780546 - 1781250 | 25865.3 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
