Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine kinase | AMED_RS08375 | Not Available | Negative | 1753317 - 1754867 | 54626.3 |
| hypothetical protein | AMED_RS08380 | Not Available | Positive | 1754969 - 1755130 | 5493.46 |
| tetr/acrr family transcriptional regulator | AMED_RS08385 | Not Available | Negative | 1755121 - 1755654 | 19523.2 |
| nuclear transport factor 2 family protein | AMED_RS08390 | Not Available | Positive | 1755745 - 1756203 | 17999.0 |
| hypothetical protein | AMED_RS08395 | Not Available | Negative | 1756200 - 1756616 | 14117.0 |
| hypothetical protein | AMED_RS08400 | Not Available | Positive | 1756933 - 1757367 | 15290.1 |
| hypothetical protein | AMED_RS49375 | Not Available | Positive | 1757497 - 1757625 | 4427.4 |
| glycosyltransferase family 4 protein | AMED_RS08405 | Not Available | Negative | 1757638 - 1758915 | 46180.3 |
| glycoside hydrolase family 2 protein | AMED_RS08410 | Not Available | Positive | 1759028 - 1760791 | 64371.7 |
| glutathione peroxidase | AMED_RS08415 | Not Available | Negative | 1760822 - 1761310 | 17429.4 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
