Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ferritin | AMED_RS00750 | Not Available | Negative | 156651 - 157205 | 20909.7 |
| arginine deiminase | AMED_RS00755 | Not Available | Negative | 157350 - 158534 | 42014.1 |
| cpbp family intramembrane glutamic endopeptidase | AMED_RS00760 | Not Available | Negative | 158576 - 159388 | 29507.3 |
| ppox class f420-dependent oxidoreductase | AMED_RS00765 | Not Available | Positive | 159411 - 159872 | 16776.9 |
| duf2470 domain-containing protein | AMED_RS00770 | Not Available | Negative | 159864 - 160658 | 28781.5 |
| hypothetical protein | AMED_RS00775 | Not Available | Positive | 160813 - 161838 | 36657.1 |
| hypothetical protein | AMED_RS00780 | Not Available | Negative | 162152 - 162592 | 15367.8 |
| mfs transporter | AMED_RS00785 | Not Available | Positive | 162789 - 164006 | 42329.8 |
| hypothetical protein | AMED_RS00790 | Not Available | Negative | 164003 - 164743 | 25644.5 |
| substrate-binding and vwa domain-containing protein | AMED_RS00795 | Not Available | Negative | 164743 - 166551 | 63651.9 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
