Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleoside hydrolase | AMED_RS08325 | Not Available | Negative | 1743057 - 1744019 | 33979.5 |
| acyltransferase | AMED_RS08330 | Not Available | Positive | 1744072 - 1744827 | 28241.3 |
| hypothetical protein | AMED_RS08335 | Not Available | Positive | 1744871 - 1745140 | 9437.61 |
| nadar family protein | AMED_RS08340 | Not Available | Negative | 1745142 - 1745711 | 21268.4 |
| threonine ammonia-lyase ilva | AMED_RS08345 | Not Available | Negative | 1745732 - 1746988 | 44513.3 |
| sige family rna polymerase sigma factor | AMED_RS08350 | Not Available | Positive | 1747077 - 1747568 | 18417.8 |
| hypothetical protein | AMED_RS08355 | Not Available | Positive | 1747565 - 1748560 | 35576.7 |
| short-chain fatty acyl-coa regulator family protein | AMED_RS08360 | Not Available | Negative | 1748561 - 1749985 | 52083.1 |
| isocitrate lyase | AMED_RS08365 | Not Available | Positive | 1750214 - 1751494 | 46872.8 |
| malate synthase a | AMED_RS08370 | Not Available | Positive | 1751590 - 1753197 | 59710.9 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
