Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiamine-binding protein | AMED_RS08175 | Not Available | Positive | 1715524 - 1715826 | 10466.4 |
| hypothetical protein | AMED_RS08180 | Not Available | Negative | 1715923 - 1716330 | 13952.4 |
| tetratricopeptide repeat protein | AMED_RS08185 | Not Available | Positive | 1716423 - 1717394 | 34125.9 |
| neutral zinc metallopeptidase | AMED_RS08190 | Not Available | Negative | 1717448 - 1718875 | 49813.7 |
| alpha-glucan family phosphorylase | AMED_RS08195 | Not Available | Positive | 1719007 - 1721535 | 93106.5 |
| hypothetical protein | AMED_RS08200 | Not Available | Negative | 1721538 - 1721732 | 7154.88 |
| hypothetical protein | AMED_RS08205 | Not Available | Positive | 1722104 - 1722889 | 28816.7 |
| hypothetical protein | AMED_RS08210 | Not Available | Positive | 1722910 - 1723233 | 10658.5 |
| putative t7ss-secreted protein | AMED_RS08215 | Not Available | Positive | 1723247 - 1723843 | 20765.4 |
| llm class f420-dependent oxidoreductase | AMED_RS08220 | Not Available | Positive | 1723908 - 1724897 | 36008.9 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
