Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS08125 | Not Available | Negative | 1702506 - 1703201 | 25990.1 |
| abc transporter substrate-binding protein | AMED_RS08130 | Not Available | Negative | 1703406 - 1704401 | 33489.8 |
| abc transporter permease | AMED_RS08135 | Not Available | Negative | 1704443 - 1705492 | 36693.7 |
| atp-binding cassette domain-containing protein | AMED_RS08140 | Not Available | Negative | 1705489 - 1706253 | 27197.0 |
| class i mannose-6-phosphate isomerase | AMED_RS08145 | Not Available | Negative | 1706250 - 1707287 | 37177.6 |
| laci family dna-binding transcriptional regulator | AMED_RS08150 | Not Available | Negative | 1707284 - 1708267 | 34940.8 |
| gh92 family glycosyl hydrolase | AMED_RS08155 | Not Available | Positive | 1708583 - 1711816 | 110978.0 |
| gh92 family glycosyl hydrolase | AMED_RS08160 | Not Available | Positive | 1711876 - 1714263 | 85121.8 |
| duf3817 domain-containing protein | AMED_RS08165 | Not Available | Positive | 1714495 - 1714860 | 12987.3 |
| marr family winged helix-turn-helix transcriptional regulator | AMED_RS08170 | Not Available | Negative | 1714944 - 1715444 | 18360.2 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
