Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidylprolyl isomerase | AMED_RS08075 | Not Available | Positive | 1692836 - 1693561 | 25520.4 |
| plp-dependent aminotransferase family protein | AMED_RS08080 | Not Available | Negative | 1693834 - 1695216 | 48583.0 |
| carboxymuconolactone decarboxylase family protein | AMED_RS08085 | Not Available | Positive | 1695263 - 1695724 | 16902.1 |
| isocitrate lyase/phosphoenolpyruvate mutase family protein | AMED_RS08090 | Not Available | Positive | 1695721 - 1696458 | 24755.4 |
| cation acetate symporter | AMED_RS08095 | Not Available | Negative | 1696525 - 1698132 | 55432.9 |
| duf485 domain-containing protein | AMED_RS08100 | Not Available | Negative | 1698129 - 1698491 | 13702.4 |
| cation acetate symporter | AMED_RS08105 | Not Available | Negative | 1698562 - 1700286 | 60017.6 |
| hypothetical protein | AMED_RS08110 | Not Available | Negative | 1700286 - 1700633 | 13127.4 |
| lyttr family dna-binding domain-containing protein | AMED_RS08115 | Not Available | Negative | 1700659 - 1701414 | 27025.7 |
| sensor histidine kinase | AMED_RS08120 | Not Available | Negative | 1701411 - 1702457 | 37491.1 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
