Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix transcriptional regulator | AMED_RS08025 | Not Available | Negative | 1682231 - 1683400 | 41673.4 |
| adenylate/guanylate cyclase domain-containing protein | AMED_RS08030 | Not Available | Negative | 1683977 - 1685116 | 42246.4 |
| universal stress protein | AMED_RS08035 | Not Available | Negative | 1685118 - 1685570 | 15383.0 |
| chromosome segregation protein | AMED_RS08040 | Not Available | Negative | 1685664 - 1686899 | 45310.1 |
| crotonyl-coa carboxylase/reductase | AMED_RS08045 | Not Available | Negative | 1687057 - 1688397 | 48815.8 |
| spw repeat protein | AMED_RS08050 | Not Available | Positive | 1688597 - 1688965 | 12837.7 |
| tetr/acrr family transcriptional regulator | AMED_RS08055 | Not Available | Positive | 1688985 - 1689557 | 20706.7 |
| methylmalonyl-coa epimerase | AMED_RS08060 | Not Available | Negative | 1689816 - 1690271 | 16264.2 |
| acetyl-coa c-acetyltransferase | AMED_RS08065 | Not Available | Positive | 1690409 - 1691596 | 40072.9 |
| methylmalonyl co-a mutase-associated gtpase meab | AMED_RS08070 | Not Available | Positive | 1691597 - 1692562 | 33889.8 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
