Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr/acrr family transcriptional regulator | AMED_RS07975 | Not Available | Negative | 1673762 - 1674355 | 21841.4 |
| phenylacetate--coa ligase paak | AMED_RS07980 | Not Available | Negative | 1674352 - 1675629 | 47031.0 |
| hydroxyphenylacetyl-coa thioesterase paai | AMED_RS07985 | Not Available | Negative | 1675632 - 1676042 | 14212.8 |
| phenylacetic acid degradation bifunctional protein paaz | AMED_RS07990 | Not Available | Positive | 1676209 - 1678236 | 70986.3 |
| 1,2-phenylacetyl-coa epoxidase subunit paaa | AMED_RS07995 | Not Available | Positive | 1678233 - 1679165 | 35367.1 |
| 1,2-phenylacetyl-coa epoxidase subunit paab | AMED_RS08000 | Not Available | Positive | 1679234 - 1679518 | 10832.7 |
| 1,2-phenylacetyl-coa epoxidase subunit paac | AMED_RS08005 | Not Available | Positive | 1679515 - 1680372 | 31260.7 |
| 1,2-phenylacetyl-coa epoxidase subunit paad | AMED_RS08010 | Not Available | Positive | 1680366 - 1680854 | 17108.5 |
| 1,2-phenylacetyl-coa epoxidase subunit paae | AMED_RS08015 | Not Available | Positive | 1680855 - 1681907 | 37664.8 |
| hypothetical protein | AMED_RS08020 | Not Available | Negative | 1681863 - 1682225 | 12562.6 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
