Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS07925 | Not Available | Positive | 1662768 - 1663187 | 14203.0 |
| tex family protein | AMED_RS07930 | Not Available | Negative | 1663237 - 1665618 | 85115.4 |
| chitinase | AMED_RS07935 | Not Available | Positive | 1665764 - 1667239 | 50380.0 |
| metal-dependent hydrolase | AMED_RS07940 | Not Available | Negative | 1667286 - 1668496 | 44082.0 |
| metal-dependent hydrolase | AMED_RS07945 | Not Available | Negative | 1668496 - 1669958 | 51665.6 |
| winged helix dna-binding domain-containing protein | AMED_RS07950 | Not Available | Negative | 1670033 - 1671127 | 39884.4 |
| arac family transcriptional regulator | AMED_RS07955 | Not Available | Positive | 1671207 - 1672262 | 38560.5 |
| tetr/acrr family transcriptional regulator | AMED_RS07960 | Not Available | Negative | 1672183 - 1672854 | 24591.7 |
| hypothetical protein | AMED_RS07965 | Not Available | Positive | 1673049 - 1673360 | 11518.2 |
| thioredoxin | AMED_RS48570 | Not Available | Positive | 1673512 - 1673757 | 9231.13 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
