Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS07875 | Not Available | Negative | 1653336 - 1653716 | 12813.0 |
| abc transporter substrate-binding protein | AMED_RS07880 | Not Available | Positive | 1653925 - 1654977 | 36352.7 |
| abc transporter atp-binding protein | AMED_RS07885 | Not Available | Positive | 1655038 - 1655829 | 27823.7 |
| abc transporter permease | AMED_RS07890 | Not Available | Positive | 1655816 - 1656763 | 32987.7 |
| duf1761 domain-containing protein | AMED_RS07895 | Not Available | Positive | 1656847 - 1657224 | 12864.2 |
| smp-30/gluconolactonase/lre family protein | AMED_RS07900 | Not Available | Positive | 1657221 - 1658039 | 28897.2 |
| dead/deah box helicase | AMED_RS07905 | Not Available | Negative | 1658102 - 1659604 | 52419.1 |
| acyl-coa dehydrogenase | AMED_RS07910 | Not Available | Positive | 1659841 - 1661547 | 62824.3 |
| nitroreductase family deazaflavin-dependent oxidoreductase | AMED_RS07915 | Not Available | Positive | 1661547 - 1661993 | 16266.4 |
| 2-keto-4-pentenoate hydratase | AMED_RS07920 | Not Available | Positive | 1661990 - 1662763 | 27330.6 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
