Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rhodanese-like domain-containing protein | AMED_RS00700 | Not Available | Positive | 147747 - 148106 | 12670.0 |
| duf4328 domain-containing protein | AMED_RS00705 | Not Available | Positive | 148109 - 149146 | 37570.9 |
| tetr/acrr family transcriptional regulator | AMED_RS00710 | Not Available | Negative | 149143 - 149733 | 22443.7 |
| dha2 family efflux mfs transporter permease subunit | AMED_RS00715 | Not Available | Positive | 149829 - 151175 | 45399.6 |
| mycothiol conjugate amidase mca | AMED_RS00720 | Not Available | Positive | 151172 - 152014 | 30697.1 |
| cytochrome p450 | AMED_RS00725 | Not Available | Negative | 152187 - 153353 | 41804.3 |
| duf5926 family protein | AMED_RS00730 | Not Available | Positive | 153407 - 154288 | 31675.6 |
| duf952 domain-containing protein | AMED_RS00735 | Not Available | Positive | 154579 - 154932 | 12808.1 |
| sige family rna polymerase sigma factor | AMED_RS00740 | Not Available | Positive | 155245 - 155757 | 18716.3 |
| hypothetical protein | AMED_RS00745 | Not Available | Positive | 155754 - 156584 | 27752.7 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
