Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 28 protein | AMED_RS07825 | Not Available | Positive | 1638430 - 1639911 | 51171.5 |
| glycoside hydrolase family 105 protein | AMED_RS07830 | Not Available | Negative | 1640088 - 1641275 | 43943.9 |
| alpha-l-fucosidase | AMED_RS07835 | Not Available | Positive | 1641628 - 1643400 | 64678.2 |
| mgh1-like glycoside hydrolase domain-containing protein | AMED_RS07840 | Not Available | Negative | 1643441 - 1644670 | 44933.8 |
| rok family transcriptional regulator | AMED_RS07845 | Not Available | Positive | 1644732 - 1645886 | 39313.4 |
| protease pro-enzyme activation domain-containing protein | AMED_RS07850 | Not Available | Positive | 1646190 - 1648121 | 67454.4 |
| sensor histidine kinase | AMED_RS07855 | Not Available | Negative | 1648212 - 1649747 | 53395.1 |
| cytosine permease | AMED_RS07860 | Not Available | Positive | 1649882 - 1651255 | 47123.1 |
| sdr family oxidoreductase | AMED_RS07865 | Not Available | Positive | 1651300 - 1651971 | 23051.4 |
| s-adenosylmethionine:trna ribosyltransferase-isomerase | AMED_RS07870 | Not Available | Positive | 1651968 - 1652975 | 35529.5 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
