Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | AMED_RS07675 | Not Available | Positive | 1602374 - 1603321 | 32124.1 |
| amino acid abc transporter permease | AMED_RS07680 | Not Available | Positive | 1603308 - 1604186 | 31374.2 |
| amino acid abc transporter atp-binding protein | AMED_RS07685 | Not Available | Positive | 1604179 - 1604946 | 27802.7 |
| aminotransferase class v-fold plp-dependent enzyme | AMED_RS07690 | Not Available | Positive | 1604943 - 1606661 | 60578.1 |
| effector-associated constant component eacc1 | AMED_RS07695 | Not Available | Positive | 1606715 - 1607092 | 13478.0 |
| macrolide family glycosyltransferase | AMED_RS07700 | Not Available | Negative | 1607127 - 1608299 | 40982.9 |
| alpha/beta hydrolase | AMED_RS07705 | Not Available | Positive | 1608599 - 1610155 | 56198.2 |
| abc transporter atp-binding protein | AMED_RS07710 | Not Available | Positive | 1610307 - 1611206 | 30699.2 |
| abc transporter permease | AMED_RS07715 | Not Available | Positive | 1611203 - 1611934 | 26324.2 |
| hypothetical protein | AMED_RS07720 | Not Available | Positive | 1612090 - 1612713 | 22209.4 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
