Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isoniazid inducible protein inia | AMED_RS07625 | Not Available | Positive | 1592629 - 1594410 | 64273.8 |
| gtpase | AMED_RS07630 | Not Available | Positive | 1594407 - 1595609 | 43231.6 |
| rida family protein | AMED_RS07635 | Not Available | Negative | 1595606 - 1595992 | 13367.1 |
| helix-turn-helix domain-containing protein | AMED_RS07640 | Not Available | Positive | 1596086 - 1596448 | 13779.5 |
| long-chain fatty acid--coa ligase | AMED_RS07645 | Not Available | Positive | 1596572 - 1598116 | 55118.7 |
| tetr/acrr family transcriptional regulator | AMED_RS07650 | Not Available | Positive | 1598116 - 1598664 | 19654.6 |
| transglycosylase slt domain-containing protein | AMED_RS07655 | Not Available | Negative | 1598827 - 1599393 | 20724.2 |
| tigr03618 family f420-dependent ppox class oxidoreductase | AMED_RS07660 | Not Available | Negative | 1599532 - 1599933 | 14625.5 |
| glycosyl hydrolase family 8 | AMED_RS07665 | Not Available | Positive | 1600090 - 1601295 | 42620.8 |
| gfo/idh/moca family protein | AMED_RS07670 | Not Available | Negative | 1601292 - 1602275 | 35148.0 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
