Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS49370 | Not Available | Negative | 1580252 - 1580386 | 4773.88 |
| ornithine cyclodeaminase family protein | AMED_RS07580 | Not Available | Negative | 1580633 - 1581541 | 31113.4 |
| is110 family transposase | AMED_RS07585 | Not Available | Positive | 1581814 - 1582866 | 38646.7 |
| pentapeptide repeat-containing protein | AMED_RS07590 | Not Available | Positive | 1582881 - 1583489 | 21883.7 |
| sulfite oxidase-like oxidoreductase | AMED_RS07595 | Not Available | Positive | 1583519 - 1584118 | 22444.3 |
| ferredoxin reductase | AMED_RS07600 | Not Available | Positive | 1584088 - 1584831 | 26639.9 |
| right-handed parallel beta-helix repeat-containing protein | AMED_RS07605 | Not Available | Positive | 1584924 - 1587560 | 92590.5 |
| helix-turn-helix transcriptional regulator | AMED_RS07610 | Not Available | Negative | 1587707 - 1590082 | 81951.2 |
| molecular chaperone dnak | AMED_RS07615 | Not Available | Negative | 1590079 - 1591218 | 38503.1 |
| inib n-terminal domain-containing protein | AMED_RS07620 | Not Available | Positive | 1591502 - 1592527 | 32848.3 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
