Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease z | AMED_RS07530 | Not Available | Positive | 1568704 - 1569618 | 33803.0 |
| response regulator | AMED_RS07535 | Not Available | Positive | 1569641 - 1571293 | 59291.0 |
| atp-binding protein | AMED_RS07540 | Not Available | Positive | 1571290 - 1572711 | 52817.8 |
| carboxylesterase/lipase family protein | AMED_RS07545 | Not Available | Positive | 1572711 - 1574204 | 52780.7 |
| hypothetical protein | AMED_RS07550 | Not Available | Positive | 1574288 - 1575364 | 38357.7 |
| toxic anion resistance protein | AMED_RS07555 | Not Available | Positive | 1575366 - 1576493 | 40282.8 |
| substrate-binding domain-containing protein | AMED_RS07560 | Not Available | Positive | 1576490 - 1578097 | 56360.0 |
| hypothetical protein | AMED_RS07565 | Not Available | Positive | 1578094 - 1578660 | 20506.8 |
| hypothetical protein | AMED_RS07570 | Not Available | Negative | 1578731 - 1579555 | 29989.4 |
| hypothetical protein | AMED_RS07575 | Not Available | Negative | 1579632 - 1579886 | 8960.34 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
