Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydroxymethylglutaryl-coa lyase | AMED_RS07480 | Not Available | Negative | 1557288 - 1558223 | 32679.3 |
| amp-binding protein | AMED_RS07485 | Not Available | Negative | 1558225 - 1559871 | 59615.6 |
| coce/nond family hydrolase | AMED_RS07490 | Not Available | Negative | 1559868 - 1561544 | 61343.4 |
| gaf domain-containing sensor histidine kinase | AMED_RS07495 | Not Available | Positive | 1561710 - 1562813 | 39199.4 |
| response regulator transcription factor | AMED_RS07500 | Not Available | Positive | 1562834 - 1563412 | 20215.5 |
| tyrosine-type recombinase/integrase | AMED_RS07505 | Not Available | Negative | 1563551 - 1564669 | 41787.7 |
| helix-turn-helix domain-containing protein | AMED_RS07510 | Not Available | Negative | 1564789 - 1565097 | 11276.3 |
| Trna-ala | Not Available | Not Available | Positive | 1565456 - 1565528 | Not Available |
| ricin domain-containing protein | AMED_RS07520 | Not Available | Positive | 1565798 - 1567975 | 77180.7 |
| hded family acid-resistance protein | AMED_RS07525 | Not Available | Positive | 1568121 - 1568690 | 19703.2 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
