Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS07425 | Not Available | Positive | 1547224 - 1547655 | 15299.5 |
| tetratricopeptide repeat protein | AMED_RS07430 | Not Available | Positive | 1548053 - 1550740 | 98492.6 |
| marr family winged helix-turn-helix transcriptional regulator | AMED_RS07440 | Not Available | Positive | 1551268 - 1551690 | 15925.8 |
| carotenoid oxygenase family protein | AMED_RS07445 | Not Available | Positive | 1551730 - 1553292 | 58172.3 |
| metal-dependent hydrolase | AMED_RS07450 | Not Available | Negative | 1553287 - 1553639 | 12858.3 |
| marr family winged helix-turn-helix transcriptional regulator | AMED_RS07455 | Not Available | Negative | 1553699 - 1554235 | 19960.8 |
| doxx family protein | AMED_RS07460 | Not Available | Positive | 1554341 - 1554721 | 12981.6 |
| nadp-dependent oxidoreductase | AMED_RS07465 | Not Available | Positive | 1554774 - 1555715 | 30472.7 |
| duf6069 family protein | AMED_RS07470 | Not Available | Positive | 1555811 - 1556239 | 14538.2 |
| dioxygenase | AMED_RS07475 | Not Available | Positive | 1556273 - 1557151 | 31841.9 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
