Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS07375 | Not Available | Positive | 1540479 - 1540646 | 6061.0 |
| hypothetical protein | AMED_RS07380 | Not Available | Positive | 1540842 - 1541339 | 19121.4 |
| tetr/acrr family transcriptional regulator | AMED_RS07385 | Not Available | Negative | 1541407 - 1541916 | 18063.7 |
| aldo/keto reductase | AMED_RS07390 | Not Available | Positive | 1542083 - 1543000 | 32438.7 |
| imm7 family immunity protein | AMED_RS07395 | Not Available | Positive | 1543248 - 1543634 | 14202.8 |
| sige family rna polymerase sigma factor | AMED_RS07400 | Not Available | Positive | 1543721 - 1544242 | 19633.6 |
| hypothetical protein | AMED_RS07405 | Not Available | Positive | 1544229 - 1545179 | 34945.0 |
| hypothetical protein | AMED_RS07410 | Not Available | Positive | 1545403 - 1545540 | 5095.25 |
| is3 family transposase | AMED_RS07415 | Not Available | Negative | 1545883 - 1546800 | 33551.6 |
| is3 family transposase | AMED_RS48235 | Not Available | Negative | 1546800 - 1547123 | 11988.4 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
