Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-gly | Not Available | Not Available | Positive | 137091 - 137163 | Not Available |
| sigma-70 family rna polymerase sigma factor | AMED_RS00655 | Not Available | Positive | 137351 - 139012 | 56466.9 |
| hypothetical protein | AMED_RS00660 | Not Available | Positive | 139126 - 139566 | 16468.0 |
| fpg/nei family dna glycosylase | AMED_RS00665 | Not Available | Positive | 139579 - 140439 | 30867.2 |
| histidine kinase | AMED_RS00670 | Not Available | Positive | 140596 - 141921 | 47902.9 |
| s49 family peptidase | AMED_RS00675 | Not Available | Positive | 141941 - 142786 | 30133.4 |
| carbohydrate-binding protein | AMED_RS00680 | Not Available | Positive | 142944 - 144332 | 48187.9 |
| lyttr family dna-binding domain-containing protein | AMED_RS00685 | Not Available | Positive | 144416 - 145249 | 30461.7 |
| hypothetical protein | AMED_RS00690 | Not Available | Positive | 145263 - 145793 | 19850.2 |
| cation acetate symporter | AMED_RS00695 | Not Available | Positive | 145825 - 147615 | 63245.7 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
