Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS07325 | Not Available | Positive | 1532190 - 1532759 | 20935.8 |
| sdr family oxidoreductase | AMED_RS07330 | Not Available | Negative | 1532833 - 1533741 | 31624.2 |
| lysr family transcriptional regulator | AMED_RS07335 | Not Available | Positive | 1533774 - 1534676 | 32584.2 |
| sdr family oxidoreductase | AMED_RS07340 | Not Available | Negative | 1534711 - 1535454 | 25222.2 |
| tetr/acrr family transcriptional regulator | AMED_RS07345 | Not Available | Positive | 1535558 - 1536130 | 20428.3 |
| fad-dependent oxidoreductase | AMED_RS07350 | Not Available | Negative | 1536105 - 1537649 | 54962.2 |
| tetr/acrr family transcriptional regulator | AMED_RS07355 | Not Available | Positive | 1537732 - 1538340 | 22254.9 |
| is3 family transposase | AMED_RS48230 | Not Available | Positive | 1538477 - 1538800 | 11988.4 |
| is3 family transposase | AMED_RS07365 | Not Available | Positive | 1538800 - 1539717 | 33551.6 |
| sukh-4 family immunity protein | AMED_RS07370 | Not Available | Positive | 1539775 - 1540167 | 14131.4 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
