Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadp-dependent oxidoreductase | AMED_RS07275 | Not Available | Negative | 1522789 - 1523730 | 32623.7 |
| tetr family transcriptional regulator | AMED_RS07280 | Not Available | Positive | 1523841 - 1524407 | 20437.2 |
| nadp-dependent oxidoreductase | AMED_RS07285 | Not Available | Negative | 1524448 - 1525398 | 31974.5 |
| helix-turn-helix domain-containing protein | AMED_RS07290 | Not Available | Positive | 1525530 - 1526393 | 31305.5 |
| hypothetical protein | AMED_RS07295 | Not Available | Positive | 1526458 - 1527738 | 47361.8 |
| sensor histidine kinase kdpd | AMED_RS07300 | Not Available | Positive | 1528150 - 1529514 | 47082.5 |
| roadblock/lc7 domain-containing protein | AMED_RS07305 | Not Available | Positive | 1529511 - 1529933 | 14575.2 |
| duf742 domain-containing protein | AMED_RS07310 | Not Available | Positive | 1529935 - 1530294 | 13196.0 |
| atp/gtp-binding protein | AMED_RS07315 | Not Available | Positive | 1530347 - 1530880 | 19599.4 |
| cytochrome p450 | AMED_RS07320 | Not Available | Positive | 1530877 - 1532085 | 44211.9 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
