Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS07225 | Not Available | Negative | 1511854 - 1512396 | 19843.6 |
| marr family winged helix-turn-helix transcriptional regulator | AMED_RS07230 | Not Available | Positive | 1512471 - 1512896 | 14641.7 |
| hypothetical protein | AMED_RS07235 | Not Available | Negative | 1512903 - 1513658 | 27520.9 |
| rhs repeat-associated core domain-containing protein | AMED_RS07240 | Not Available | Negative | 1513683 - 1518248 | 165416.0 |
| type vii secretion target | AMED_RS07245 | Not Available | Negative | 1518245 - 1518583 | 11393.7 |
| ybab/ebfc family nucleoid-associated protein | AMED_RS07250 | Not Available | Negative | 1518602 - 1519147 | 19509.8 |
| dinb family protein | AMED_RS07255 | Not Available | Negative | 1519798 - 1520589 | 29129.5 |
| hypothetical protein | AMED_RS07260 | Not Available | Negative | 1520687 - 1521127 | 16654.3 |
| hypothetical protein | AMED_RS07265 | Not Available | Positive | 1521268 - 1522266 | 34744.0 |
| muconolactone delta-isomerase family protein | AMED_RS07270 | Not Available | Negative | 1522379 - 1522699 | 11788.7 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
