Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ricin domain-containing protein | AMED_RS07170 | Not Available | Negative | 1499508 - 1500962 | 51294.5 |
| lytic polysaccharide monooxygenase | AMED_RS07175 | Not Available | Negative | 1501139 - 1501801 | 24177.2 |
| hypothetical protein | AMED_RS07180 | Not Available | Positive | 1502073 - 1502693 | 21481.5 |
| tigr03619 family f420-dependent llm class oxidoreductase | AMED_RS07185 | Not Available | Negative | 1502776 - 1503669 | 31831.8 |
| duf72 domain-containing protein | AMED_RS07190 | Not Available | Positive | 1503929 - 1504753 | 30867.6 |
| fkbm family methyltransferase | AMED_RS07195 | Not Available | Negative | 1504768 - 1505907 | 41398.9 |
| ig-like domain-containing protein | AMED_RS07200 | Not Available | Positive | 1506046 - 1507263 | 42110.1 |
| mfs transporter | AMED_RS07210 | Not Available | Positive | 1507647 - 1509239 | 54652.5 |
| m1 family metallopeptidase | AMED_RS07215 | Not Available | Negative | 1509256 - 1510677 | 51383.1 |
| rip homotypic interaction motif-containing protein | AMED_RS07220 | Not Available | Negative | 1510830 - 1511864 | 37833.5 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
