Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS07120 | Not Available | Negative | 1490184 - 1490354 | 5813.07 |
| gnat family n-acetyltransferase | AMED_RS07125 | Not Available | Negative | 1490505 - 1491089 | 22369.6 |
| hypothetical protein | AMED_RS07130 | Not Available | Negative | 1491133 - 1491702 | 19627.9 |
| hypothetical protein | AMED_RS07135 | Not Available | Positive | 1491811 - 1492425 | 23138.4 |
| carboxymuconolactone decarboxylase family protein | AMED_RS07140 | Not Available | Positive | 1492494 - 1492985 | 17466.7 |
| mdr family mfs transporter | AMED_RS07145 | Not Available | Negative | 1492943 - 1494337 | 46936.7 |
| aldehyde dehydrogenase | AMED_RS07150 | Not Available | Negative | 1494334 - 1495788 | 51371.9 |
| tetr/acrr family transcriptional regulator | AMED_RS07155 | Not Available | Positive | 1495871 - 1496437 | 21041.2 |
| glycoside hydrolase family 15 protein | AMED_RS07160 | Not Available | Negative | 1496484 - 1498286 | 65682.3 |
| glucose 1-dehydrogenase | AMED_RS07165 | Not Available | Negative | 1498292 - 1499344 | 37359.8 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
