Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator transcription factor | AMED_RS07070 | Not Available | Negative | 1478177 - 1478833 | 23459.5 |
| sensor histidine kinase | AMED_RS07075 | Not Available | Negative | 1478821 - 1480020 | 42012.1 |
| abc transporter atp-binding protein | AMED_RS07080 | Not Available | Positive | 1480154 - 1480894 | 26209.7 |
| hypothetical protein | AMED_RS49660 | Not Available | Negative | 1481043 - 1481270 | 7182.4 |
| abc transporter permease | AMED_RS07090 | Not Available | Positive | 1481286 - 1483427 | 72716.1 |
| glycoside hydrolase family 11 protein | AMED_RS07095 | Not Available | Positive | 1483569 - 1484234 | 24181.8 |
| polysaccharide deacetylase family protein | AMED_RS07100 | Not Available | Positive | 1484237 - 1484899 | 23053.2 |
| abc transporter atp-binding protein | AMED_RS07105 | Not Available | Positive | 1485120 - 1486016 | 30742.5 |
| abc transporter permease | AMED_RS07110 | Not Available | Positive | 1486013 - 1487350 | 46265.5 |
| alkaline phosphatase family protein | AMED_RS07115 | Not Available | Positive | 1487356 - 1490100 | 97562.0 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
