Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | AMED_RS07020 | Not Available | Positive | 1468598 - 1469575 | 34489.4 |
| abc transporter atp-binding protein | AMED_RS07025 | Not Available | Positive | 1469794 - 1470600 | 28143.4 |
| abc transporter atp-binding protein | AMED_RS07030 | Not Available | Positive | 1470593 - 1471300 | 24788.2 |
| branched-chain amino acid abc transporter permease | AMED_RS07035 | Not Available | Positive | 1471368 - 1472219 | 29698.2 |
| branched-chain amino acid abc transporter permease | AMED_RS07040 | Not Available | Positive | 1472216 - 1473286 | 37301.3 |
| abc transporter substrate-binding protein | AMED_RS07045 | Not Available | Positive | 1473273 - 1474586 | 45479.8 |
| tetr/acrr family transcriptional regulator | AMED_RS07050 | Not Available | Positive | 1474645 - 1475211 | 21350.7 |
| nacht domain-containing ntpase | AMED_RS07055 | Not Available | Positive | 1475299 - 1477389 | 75365.6 |
| hpf/raia family ribosome-associated protein | AMED_RS07060 | Not Available | Positive | 1477481 - 1477891 | 14675.1 |
| hypothetical protein | AMED_RS07065 | Not Available | Negative | 1477914 - 1478105 | 6682.46 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
