Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| marr family winged helix-turn-helix transcriptional regulator | AMED_RS06970 | Not Available | Positive | 1455692 - 1456189 | 18082.7 |
| mbl fold metallo-hydrolase | AMED_RS06975 | Not Available | Negative | 1456199 - 1457143 | 33749.2 |
| pts sugar transporter subunit iib | AMED_RS06980 | Not Available | Positive | 1457555 - 1458031 | 16970.6 |
| pts system mannose/fructose/sorbose family transporter subunit iid | AMED_RS06985 | Not Available | Positive | 1458039 - 1459670 | 57210.9 |
| pts sugar transporter subunit iia | AMED_RS06990 | Not Available | Positive | 1459784 - 1460173 | 13407.2 |
| hypothetical protein | AMED_RS06995 | Not Available | Positive | 1460170 - 1461480 | 46254.8 |
| gntr family transcriptional regulator | AMED_RS07000 | Not Available | Negative | 1461491 - 1462261 | 28604.9 |
| btad domain-containing putative transcriptional regulator | AMED_RS07005 | Not Available | Negative | 1462621 - 1465704 | 109758.0 |
| thioesterase ii family protein | AMED_RS07010 | Not Available | Positive | 1465895 - 1466515 | 21878.4 |
| mfs transporter | AMED_RS07015 | Not Available | Positive | 1466679 - 1467923 | 41996.0 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
