Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | AMED_RS06920 | Not Available | Positive | 1445584 - 1446495 | 32143.0 |
| abc transporter permease | AMED_RS06925 | Not Available | Positive | 1446492 - 1447334 | 28817.8 |
| lipase | AMED_RS06930 | Not Available | Negative | 1447324 - 1448130 | 26981.2 |
| chat domain-containing protein | AMED_RS06935 | Not Available | Negative | 1448237 - 1450816 | 89440.4 |
| s8/s53 family peptidase | AMED_RS06940 | Not Available | Positive | 1450913 - 1452055 | 40471.6 |
| hypothetical protein | AMED_RS06945 | Not Available | Negative | 1452052 - 1452498 | 15254.9 |
| rna polymerase sigma factor | AMED_RS06950 | Not Available | Negative | 1452495 - 1453055 | 20607.5 |
| hypothetical protein | AMED_RS06955 | Not Available | Positive | 1453246 - 1453419 | 5869.48 |
| glycoside hydrolase family 64 protein | AMED_RS06960 | Not Available | Negative | 1453416 - 1454600 | 41885.1 |
| eama family transporter | AMED_RS06965 | Not Available | Negative | 1454638 - 1455552 | 31435.3 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
