Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr/acrr family transcriptional regulator | AMED_RS06870 | Not Available | Negative | 1436393 - 1436998 | 21915.4 |
| tigr03086 family metal-binding protein | AMED_RS06875 | Not Available | Negative | 1437342 - 1439048 | 60673.1 |
| tetr/acrr family transcriptional regulator | AMED_RS06880 | Not Available | Positive | 1439134 - 1439775 | 23252.8 |
| duf11 domain-containing protein | AMED_RS06885 | Not Available | Positive | 1439953 - 1440780 | 27670.4 |
| serine protease | AMED_RS06890 | Not Available | Negative | 1440880 - 1441686 | 26521.1 |
| hypothetical protein | AMED_RS06895 | Not Available | Negative | 1441800 - 1441928 | 4586.53 |
| hypothetical protein | AMED_RS06900 | Not Available | Positive | 1441917 - 1442132 | 7718.35 |
| rhomboid family intramembrane serine protease | AMED_RS06905 | Not Available | Negative | 1442125 - 1442772 | 23091.3 |
| dihydropteroate synthase | AMED_RS06910 | Not Available | Positive | 1442866 - 1443744 | 31319.0 |
| hypothetical protein | AMED_RS06915 | Not Available | Positive | 1444460 - 1445587 | 38523.2 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
