Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS00600 | Not Available | Negative | 125045 - 126178 | 40635.6 |
| alginate o-acetyltransferase algx-related protein | AMED_RS00605 | Not Available | Negative | 126203 - 127486 | 46934.4 |
| glycosyltransferase | AMED_RS00610 | Not Available | Negative | 127483 - 129894 | 87270.8 |
| hypothetical protein | AMED_RS00615 | Not Available | Negative | 129896 - 131098 | 41678.4 |
| hypothetical protein | AMED_RS00620 | Not Available | Negative | 131204 - 132397 | 41944.1 |
| hypothetical protein | AMED_RS00625 | Not Available | Positive | 132624 - 134393 | 64321.2 |
| hypothetical protein | AMED_RS00630 | Not Available | Positive | 134501 - 135106 | 22626.0 |
| alpha/beta fold hydrolase | AMED_RS00635 | Not Available | Negative | 135084 - 135764 | 24107.4 |
| duf2716 domain-containing protein | AMED_RS00640 | Not Available | Positive | 135899 - 136438 | 20498.2 |
| immunity 7 family protein | AMED_RS00645 | Not Available | Positive | 136472 - 136873 | 15028.5 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
