Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s1 family peptidase | AMED_RS06770 | Not Available | Positive | 1414282 - 1415298 | 34077.7 |
| cyclopropane-fatty-acyl-phospholipid synthase family protein | AMED_RS06775 | Not Available | Negative | 1415355 - 1415978 | 23303.3 |
| discoidin domain-containing protein | AMED_RS06780 | Not Available | Negative | 1416056 - 1417633 | 53367.6 |
| sdr family oxidoreductase | AMED_RS06785 | Not Available | Positive | 1417804 - 1418532 | 24809.2 |
| cytochrome p450 | AMED_RS06790 | Not Available | Positive | 1418630 - 1419829 | 43716.1 |
| aspartate--trna(asn) ligase | AMED_RS06795 | Not Available | Positive | 1420155 - 1421369 | 44450.1 |
| sco6745 family protein | AMED_RS06800 | Not Available | Positive | 1421379 - 1422206 | 29000.7 |
| sdr family nad(p)-dependent oxidoreductase | AMED_RS06805 | Not Available | Positive | 1422270 - 1423025 | 25534.8 |
| abate domain-containing protein | AMED_RS06810 | Not Available | Negative | 1423063 - 1423629 | 20047.7 |
| alpha/beta fold hydrolase | AMED_RS06815 | Not Available | Positive | 1423730 - 1424599 | 31238.1 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
