Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| siderophore-interacting protein | AMED_RS06720 | Not Available | Negative | 1402996 - 1403820 | 29623.0 |
| excinuclease abc subunit uvra | AMED_RS06725 | Not Available | Negative | 1403817 - 1406090 | 81065.2 |
| tetr/acrr family transcriptional regulator | AMED_RS06730 | Not Available | Positive | 1406167 - 1406961 | 28357.0 |
| class i sam-dependent methyltransferase | AMED_RS06735 | Not Available | Negative | 1406939 - 1407688 | 27353.4 |
| hypothetical protein | AMED_RS06740 | Not Available | Negative | 1407691 - 1407921 | 8068.89 |
| phage holin family protein | AMED_RS06745 | Not Available | Negative | 1407918 - 1410029 | 76026.4 |
| deda family protein | AMED_RS06750 | Not Available | Negative | 1410026 - 1410607 | 20293.4 |
| mbl fold metallo-hydrolase | AMED_RS06755 | Not Available | Negative | 1410604 - 1411386 | 27432.1 |
| terpene synthase family protein | AMED_RS06760 | Not Available | Negative | 1411447 - 1413702 | 83858.5 |
| gnat family n-acetyltransferase | AMED_RS06765 | Not Available | Positive | 1413833 - 1414129 | 10973.8 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
