Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | AMED_RS06670 | Not Available | Negative | 1393182 - 1394165 | 33425.7 |
| abc transporter permease | AMED_RS06675 | Not Available | Negative | 1394162 - 1395112 | 32345.7 |
| sugar abc transporter atp-binding protein | AMED_RS06680 | Not Available | Negative | 1395093 - 1396670 | 56425.4 |
| abc transporter substrate-binding protein | AMED_RS06685 | Not Available | Negative | 1396667 - 1397746 | 37713.4 |
| laci family dna-binding transcriptional regulator | AMED_RS06690 | Not Available | Positive | 1397900 - 1398904 | 35398.4 |
| aaa family atpase | AMED_RS06695 | Not Available | Negative | 1398911 - 1400068 | 41645.0 |
| helix-turn-helix domain-containing protein | AMED_RS06700 | Not Available | Negative | 1400129 - 1400620 | 17592.1 |
| sdr family oxidoreductase | AMED_RS06705 | Not Available | Positive | 1400722 - 1401426 | 24296.1 |
| tetr/acrr family transcriptional regulator | AMED_RS06710 | Not Available | Positive | 1401548 - 1402111 | 20059.1 |
| phosphotransferase family protein | AMED_RS06715 | Not Available | Negative | 1402139 - 1403011 | 31711.0 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
