Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna topoisomerase (atp-hydrolyzing) subunit a | AMED_RS06620 | Not Available | Negative | 1379163 - 1381649 | 89764.5 |
| type iia dna topoisomerase subunit b | AMED_RS06625 | Not Available | Negative | 1381679 - 1383730 | 74570.2 |
| hypothetical protein | AMED_RS06630 | Not Available | Negative | 1383865 - 1385367 | 52225.6 |
| llm class flavin-dependent oxidoreductase | AMED_RS06635 | Not Available | Positive | 1385475 - 1386584 | 40901.4 |
| fmn reductase | AMED_RS06640 | Not Available | Positive | 1386581 - 1387168 | 20072.0 |
| dihydrofolate reductase family protein | AMED_RS06645 | Not Available | Negative | 1387231 - 1387839 | 21575.5 |
| serine hydrolase | AMED_RS06650 | Not Available | Positive | 1387994 - 1389439 | 50591.9 |
| pgpgw domain-containing protein | AMED_RS06655 | Not Available | Positive | 1389418 - 1389846 | 14924.8 |
| tetr family transcriptional regulator | AMED_RS06660 | Not Available | Positive | 1389857 - 1390507 | 23116.8 |
| glycoside hydrolase family 2 | AMED_RS06665 | Not Available | Negative | 1390656 - 1393151 | 89415.0 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
