Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thioredoxin domain-containing protein | AMED_RS06570 | Not Available | Positive | 1370085 - 1370831 | 26253.0 |
| hypothetical protein | AMED_RS06575 | Not Available | Positive | 1371000 - 1371329 | 11642.4 |
| c40 family peptidase | AMED_RS06580 | Not Available | Positive | 1371326 - 1372444 | 38232.9 |
| hypothetical protein | AMED_RS06585 | Not Available | Positive | 1372448 - 1372831 | 13528.8 |
| ybab/ebfc family nucleoid-associated protein | AMED_RS06590 | Not Available | Positive | 1372828 - 1373322 | 17862.0 |
| 4-hydroxybenzoate 3-monooxygenase | AMED_RS06595 | Not Available | Negative | 1373319 - 1374461 | 41650.4 |
| arac family transcriptional regulator | AMED_RS06600 | Not Available | Negative | 1374534 - 1375304 | 27931.4 |
| duf664 domain-containing protein | AMED_RS06605 | Not Available | Negative | 1375342 - 1375833 | 18019.3 |
| glycoside hydrolase family 3 n-terminal domain-containing protein | AMED_RS06610 | Not Available | Positive | 1375988 - 1377820 | 65292.0 |
| ricin domain-containing protein | AMED_RS06615 | Not Available | Positive | 1377849 - 1379120 | 46016.0 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
