Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sensor histidine kinase | AMED_RS06520 | Not Available | Positive | 1357191 - 1358765 | 55287.8 |
| response regulator transcription factor | AMED_RS06525 | Not Available | Positive | 1358762 - 1359436 | 22870.0 |
| fad-dependent monooxygenase | AMED_RS06530 | Not Available | Negative | 1359381 - 1360517 | 40629.7 |
| tetr/acrr family transcriptional regulator | AMED_RS06535 | Not Available | Positive | 1360458 - 1361111 | 22873.2 |
| tetratricopeptide repeat protein | AMED_RS06540 | Not Available | Positive | 1361405 - 1364359 | 107242.0 |
| abc transporter permease | AMED_RS06545 | Not Available | Negative | 1364433 - 1365221 | 26525.9 |
| atp-binding cassette domain-containing protein | AMED_RS06550 | Not Available | Negative | 1365218 - 1366132 | 31959.7 |
| atp-dependent helicase hrpb | AMED_RS06555 | Not Available | Negative | 1366204 - 1368597 | 84619.7 |
| glutamate abc transporter substrate-binding protein | AMED_RS06560 | Not Available | Negative | 1368594 - 1369424 | 29439.9 |
| maue/doxx family redox-associated membrane protein | AMED_RS06565 | Not Available | Positive | 1369512 - 1370018 | 17295.2 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
