Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| allantoate amidohydrolase | AMED_RS06470 | Not Available | Positive | 1346986 - 1348182 | 41407.8 |
| formimidoylglutamate deiminase | AMED_RS06475 | Not Available | Positive | 1348284 - 1349534 | 44523.1 |
| imidazolonepropionase | AMED_RS06480 | Not Available | Positive | 1349522 - 1350667 | 39646.9 |
| nad(p)/fad-dependent oxidoreductase | AMED_RS06485 | Not Available | Positive | 1350775 - 1351932 | 41331.5 |
| alpha/beta hydrolase | AMED_RS06490 | Not Available | Negative | 1351916 - 1352779 | 29347.0 |
| apolipoprotein n-acyltransferase | AMED_RS06495 | Not Available | Negative | 1352861 - 1354279 | 49188.7 |
| inorganic phosphate transporter | AMED_RS06500 | Not Available | Positive | 1354474 - 1355601 | 37990.7 |
| hypothetical protein | AMED_RS06505 | Not Available | Positive | 1355610 - 1355831 | 7315.08 |
| hypothetical protein | AMED_RS06510 | Not Available | Negative | 1355813 - 1356559 | 26961.8 |
| hypothetical protein | AMED_RS06515 | Not Available | Negative | 1356556 - 1356765 | 7512.99 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
