Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator transcription factor | AMED_RS06425 | Not Available | Negative | 1336386 - 1337027 | 22553.3 |
| sensor histidine kinase | AMED_RS06430 | Not Available | Negative | 1337067 - 1338200 | 41071.8 |
| sensor domain-containing protein | AMED_RS06435 | Not Available | Negative | 1338197 - 1338871 | 24560.2 |
| Tmrna,resume consensus sequence (at 88): aataagcgccgactccag | Not Available | Not Available | Positive | 1339024 - 1339389 | Not Available |
| hypothetical protein | AMED_RS47930 | Not Available | Positive | 1340064 - 1340219 | 5460.51 |
| diguanylate cyclase | AMED_RS49365 | Not Available | Negative | 1340224 - 1341462 | 44041.3 |
| mfs transporter | AMED_RS06450 | Not Available | Negative | 1341602 - 1342819 | 41198.2 |
| iclr family transcriptional regulator | AMED_RS06455 | Not Available | Negative | 1342941 - 1343723 | 27737.6 |
| histidine ammonia-lyase | AMED_RS06460 | Not Available | Positive | 1343808 - 1345334 | 53102.0 |
| urocanate hydratase | AMED_RS06465 | Not Available | Positive | 1345337 - 1346989 | 59683.6 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
