Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isas1 family transposase | AMED_RS00550 | Not Available | Positive | 113738 - 114847 | 40081.2 |
| voc family protein | AMED_RS00555 | Not Available | Negative | 114938 - 115822 | 31593.9 |
| rna polymerase sigma factor | AMED_RS00560 | Not Available | Negative | 115815 - 116339 | 19597.3 |
| mfs transporter | AMED_RS00565 | Not Available | Negative | 116392 - 117816 | 48712.8 |
| helix-turn-helix transcriptional regulator | AMED_RS00570 | Not Available | Positive | 117918 - 118751 | 31994.5 |
| sensor histidine kinase | AMED_RS00575 | Not Available | Positive | 118818 - 119924 | 38714.8 |
| response regulator transcription factor | AMED_RS00580 | Not Available | Positive | 119921 - 120589 | 24103.1 |
| gdp-mannose 4,6-dehydratase | AMED_RS00585 | Not Available | Positive | 120794 - 121789 | 37162.4 |
| fkbm family methyltransferase | AMED_RS00590 | Not Available | Positive | 121786 - 122700 | 34007.7 |
| glycosyltransferase | AMED_RS00595 | Not Available | Negative | 122694 - 125048 | 84705.0 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
