Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aarf/abc1/ubib kinase family protein | AMED_RS06325 | Not Available | Negative | 1316776 - 1318116 | 48864.4 |
| thif family adenylyltransferase | AMED_RS06330 | Not Available | Negative | 1318177 - 1319223 | 37411.3 |
| m48 family metallopeptidase | AMED_RS06335 | Not Available | Positive | 1319454 - 1319963 | 19282.2 |
| zinc-dependent metalloprotease | AMED_RS06340 | Not Available | Negative | 1320170 - 1321543 | 49120.6 |
| pdz domain-containing protein | AMED_RS06345 | Not Available | Positive | 1321645 - 1322751 | 38628.0 |
| ppa1309 family protein | AMED_RS06350 | Not Available | Negative | 1322748 - 1323299 | 19198.8 |
| upf0182 family protein | AMED_RS06355 | Not Available | Positive | 1323422 - 1326448 | 108430.0 |
| Trna-met | Not Available | Not Available | Positive | 1326516 - 1326589 | Not Available |
| fad-dependent monooxygenase | AMED_RS06365 | Not Available | Negative | 1326723 - 1328141 | 51326.2 |
| tetr/acrr family transcriptional regulator c-terminal domain-containing protein | AMED_RS06370 | Not Available | Positive | 1328236 - 1328820 | 21527.7 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
