Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS06275 | Not Available | Negative | 1308946 - 1309452 | 18212.8 |
| duf4191 domain-containing protein | AMED_RS06280 | Not Available | Negative | 1309797 - 1310525 | 26387.8 |
| atp-dependent dna helicase uvrd2 | AMED_RS06285 | Not Available | Positive | 1310582 - 1312675 | 75990.6 |
| hypothetical protein | AMED_RS06290 | Not Available | Positive | 1312880 - 1313137 | 9152.1 |
| whib family transcriptional regulator | AMED_RS06295 | Not Available | Positive | 1313290 - 1313646 | 12399.7 |
| hypothetical protein | AMED_RS06300 | Not Available | Positive | 1313643 - 1313897 | 9876.55 |
| hypothetical protein | AMED_RS06305 | Not Available | Positive | 1314011 - 1314199 | 6871.76 |
| bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-o-methyltransferase ubig | AMED_RS06310 | Not Available | Positive | 1314642 - 1315508 | 30410.5 |
| hypothetical protein | AMED_RS06315 | Not Available | Positive | 1315505 - 1315690 | 6899.09 |
| hypothetical protein | AMED_RS06320 | Not Available | Negative | 1315725 - 1316612 | 32409.4 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
