Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s ribosomal rna | Not Available | Not Available | Positive | 1296968 - 1300089 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | Positive | 1300156 - 1300272 | Not Available |
| lrp/asnc family transcriptional regulator | AMED_RS06235 | Not Available | Negative | 1300453 - 1300905 | 16815.3 |
| rhodanese-like domain-containing protein | AMED_RS06240 | Not Available | Positive | 1301017 - 1301439 | 14899.7 |
| type 1 glutamine amidotransferase | AMED_RS06245 | Not Available | Positive | 1301455 - 1302201 | 26635.8 |
| metal-dependent hydrolase | AMED_RS06250 | Not Available | Positive | 1302296 - 1303347 | 37060.2 |
| bifunctional | AMED_RS06255 | Not Available | Positive | 1303377 - 1306352 | 106959.0 |
| thioesterase family protein | AMED_RS06260 | Not Available | Positive | 1306367 - 1306792 | 15797.1 |
| type i glutamate--ammonia ligase | AMED_RS06265 | Not Available | Negative | 1306866 - 1308290 | 53103.2 |
| rdd family protein | AMED_RS06270 | Not Available | Positive | 1308560 - 1308949 | 13337.6 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
