Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylated-dna--[protein]-cysteine s-methyltransferase | AMED_RS06175 | Not Available | Negative | 1282592 - 1283125 | 18503.3 |
| voc family protein | AMED_RS06180 | Not Available | Positive | 1283164 - 1283778 | 21257.2 |
| nad+ synthase | AMED_RS06185 | Not Available | Negative | 1283775 - 1285496 | 62452.8 |
| accessory sec system translocase seca2 | AMED_RS06190 | Not Available | Negative | 1285660 - 1287999 | 86076.9 |
| alpha/beta hydrolase | AMED_RS06195 | Not Available | Positive | 1288155 - 1289711 | 54662.0 |
| lppx_lprafg lipoprotein | AMED_RS06200 | Not Available | Negative | 1289734 - 1290363 | 21695.6 |
| mfs transporter | AMED_RS06205 | Not Available | Positive | 1290451 - 1291731 | 44318.7 |
| type i glutamate--ammonia ligase | AMED_RS06210 | Not Available | Positive | 1291793 - 1293136 | 49855.6 |
| amidase | AMED_RS06215 | Not Available | Positive | 1293136 - 1294695 | 54143.6 |
| 16s ribosomal rna | Not Available | Not Available | Positive | 1295129 - 1296645 | Not Available |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
