Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | AMED_RS06125 | Not Available | Positive | 1270459 - 1271661 | 43003.5 |
| abc transporter permease | AMED_RS06130 | Not Available | Positive | 1271737 - 1272567 | 29666.7 |
| abc transporter permease | AMED_RS06135 | Not Available | Positive | 1272576 - 1273373 | 28394.2 |
| prolyl aminopeptidase | AMED_RS06140 | Not Available | Negative | 1273386 - 1274330 | 34492.9 |
| undecaprenyl-diphosphate phosphatase | AMED_RS06145 | Not Available | Positive | 1274809 - 1275735 | 32653.5 |
| cytochrome c oxidase assembly protein | AMED_RS06150 | Not Available | Positive | 1275737 - 1276585 | 30786.9 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | AMED_RS06155 | Not Available | Negative | 1276594 - 1277463 | 30802.9 |
| bifunctional lysylphosphatidylglycerol synthetase/lysine--trna ligase lysx | AMED_RS06160 | Not Available | Positive | 1277702 - 1281025 | 121814.0 |
| hypothetical protein | AMED_RS06165 | Not Available | Positive | 1281089 - 1281655 | 20027.1 |
| dinb family protein | AMED_RS06170 | Not Available | Positive | 1281729 - 1282319 | 21455.3 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
