Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rnb domain-containing ribonuclease | AMED_RS06075 | Not Available | Positive | 1259445 - 1260851 | 50138.6 |
| helical backbone metal receptor | AMED_RS06080 | Not Available | Positive | 1260848 - 1261624 | 28244.5 |
| aldehyde dehydrogenase family protein | AMED_RS06085 | Not Available | Negative | 1261596 - 1263023 | 49401.9 |
| 4-aminobutyrate--2-oxoglutarate transaminase | AMED_RS06090 | Not Available | Negative | 1263020 - 1264375 | 46773.0 |
| pucr family transcriptional regulator | AMED_RS06095 | Not Available | Positive | 1264477 - 1265940 | 51605.1 |
| hypothetical protein | AMED_RS06100 | Not Available | Positive | 1265966 - 1266364 | 13465.1 |
| cache domain-containing protein | AMED_RS06105 | Not Available | Negative | 1266340 - 1267068 | 25838.7 |
| fadr/gntr family transcriptional regulator | AMED_RS06110 | Not Available | Negative | 1267103 - 1267837 | 26113.1 |
| gamma-aminobutyraldehyde dehydrogenase | AMED_RS06115 | Not Available | Positive | 1267948 - 1269369 | 50521.1 |
| abc transporter atp-binding protein | AMED_RS06120 | Not Available | Positive | 1269378 - 1270448 | 38826.2 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
