Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Ncrna_class:rnase_p_rna | Not Available | Not Available | Positive | 1245614 - 1246018 | Not Available |
| sco6745 family protein | AMED_RS06030 | Not Available | Positive | 1246239 - 1247093 | 30123.7 |
| hypothetical protein | AMED_RS06035 | Not Available | Positive | 1247551 - 1247817 | 8924.29 |
| hypothetical protein | AMED_RS06040 | Not Available | Positive | 1247830 - 1248366 | 19637.8 |
| atp-binding protein | AMED_RS06045 | Not Available | Positive | 1248370 - 1251324 | 108647.0 |
| hypothetical protein | AMED_RS06050 | Not Available | Positive | 1251321 - 1253405 | 73761.4 |
| hypothetical protein | AMED_RS06055 | Not Available | Positive | 1253409 - 1254011 | 21228.7 |
| c40 family peptidase | AMED_RS06060 | Not Available | Positive | 1254014 - 1255015 | 35520.4 |
| hypothetical protein | AMED_RS06065 | Not Available | Positive | 1258192 - 1258377 | 7186.11 |
| aaa family atpase | AMED_RS06070 | Not Available | Negative | 1258374 - 1259318 | 34151.6 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
